PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1080600.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 564aa MW: 62000.6 Da PI: 6.8866 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 106.3 | 1.5e-33 | 253 | 310 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDg+nWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k Pd.00g1080600.m01 253 DDGFNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGNHNHPK 310 8****************************************.***************85 PP | |||||||
2 | WRKY | 105.6 | 2.6e-33 | 424 | 482 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnh+ Pd.00g1080600.m01 424 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHD 482 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 564 aa Download sequence |
MASSSGSLDT SANSHPTFTF STHPFMTTSF SDLLASGTDE DPSTNTTARH VGHGGLADRI 60 AERTGSGVPK FKSLPPPSLP ISPPSVSPSS YFAIPAGLSP AELLDSPVLL STSNILPSPT 120 TGSFAAQAFW KANSGNNQQI VKQEIKNYSD FSFQTQTRPF TSSSTMFQSS NGTIQTAQEQ 180 GWSNSYFQAQ EPQKQDDFSS GKSMVKPEYG SVQSFSSGMA TNIQNNSQAN GGFQSEYSNY 240 NHQQSQTLSR KSDDGFNWRK YGQKQVKGSE NPRSYYKCTY PNCPTKKKVE RSLDGQITEI 300 VYKGNHNHPK PQNTRRSSSN SSHAIQASNP NTNEIPDQSF ANHGNSQMDS IGTPENSSIS 360 MGDDDFEQSS QKSKSGGGDE FDEDEPNAKR WKKEVDNEGI SAPGSRTVRE PRVVVQTTSD 420 IDILDDGYRW RKYGQKVVKG NPNPRSYYKC TNPGCPVRKH VERASHDLRA VITTYEGKHN 480 HDVPAAPTAM RPVAHQTNNL RQQTSEGQQA PFTLEMLQSP GSFGFAGFDN SMGSYMNQAQ 540 LNENMFSKTK EEPRDDAFFE SLLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 1e-112 | WRKY family protein |