PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1079160.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 271aa    MW: 30475.4 Da    PI: 10.0858
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1079160.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.51.7e-14100144347
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        +WT++E++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
  Pd.00g1079160.m01 100 PWTEDEHKLFLLGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 144
                        8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MFENALAVHD KDTPDRWLKV AAMIPGKTAM DVMKQYEELE VDVGKIEAGL VPIPGYSASP  60
FTLEWVNRHG YDGFKQSYGL GGKRSSSARP ADHERKKGVP WTEDEHKLFL LGLKKYGKGD  120
WRNISRNFVV TRTPTQVASH AQKYFIRQLS GGKDKRRASI HDITTVNLND MRTPSPDNKR  180
PLSPELSVPQ QPNSAATART PFQWHHQQGG GANMAFNQAH RNMFMSHPYG IGSYGLKMQG  240
QDLHKGAANN SYYGPQNMVF QMQSAQHYPY G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.15e-79MYB family protein