PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1076210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 374aa MW: 42220.9 Da PI: 7.6147

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1076210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	8.8e-05	214	233	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ Pd.00g1076210.m01 214 FSCPLCFKTFNRYNNMQMHM 233 89*****************9 PP
2	zf-C2H2	14.4	0.00011	298	320	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ Pd.00g1076210.m01 298 FMCRKCGKAFAVRGDWRTHEKNC 320 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MTDPYSNYFN NGRFNLNPLH HISSPSAPSS INPYNFHAPP NYRDYNNFCS SNNLMVHNQS 60 FFINHHQSSS SSSSPPSPPL REALPLLSLS PSRHHHPHED LQEPSFNAME ADHQNNNNSR 120 KDSADHQSLV VSSSADIVDQ DEDDETVTVA LHLGLPSRTL SADLISRLSS PEISSDKEVV 180 DVTVASAGYA PNRLNKGQYW IPTPAQILIG PTQFSCPLCF KTFNRYNNMQ MHMWGHGSQY 240 RKGPESLRGT QPTAMLRLPC YCCAPGCRNN IDHPRSKPLK DFRTLQTHYK RKHGIKPFMC 300 RKCGKAFAVR GDWRTHEKNC GKLWYCTCGS DFKHKRSLKD HIKAFGHGHA AYGIDCFEED 360 DDAASEIEEN YSSQ

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MTDPYSNYFN NGRFNLNPLH HISSPSAPSS INPYNFHAPP NYRDYNNFCS SNNLMVHNQS  60
FFINHHQSSS SSSSPPSPPL REALPLLSLS PSRHHHPHED LQEPSFNAME ADHQNNNNSR  120
KDSADHQSLV VSSSADIVDQ DEDDETVTVA LHLGLPSRTL SADLISRLSS PEISSDKEVV  180
DVTVASAGYA PNRLNKGQYW IPTPAQILIG PTQFSCPLCF KTFNRYNNMQ MHMWGHGSQY  240
RKGPESLRGT QPTAMLRLPC YCCAPGCRNN IDHPRSKPLK DFRTLQTHYK RKHGIKPFMC  300
RKCGKAFAVR GDWRTHEKNC GKLWYCTCGS DFKHKRSLKD HIKAFGHGHA AYGIDCFEED  360
DDAASEIEEN YSSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-121	C2H2 family protein