PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1074740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 318aa    MW: 34603.4 Da    PI: 4.8073
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1074740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.55.1e-32119176260
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                        +D ynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ +++++ei+Y+g Hnh+k
  Pd.00g1074740.m01 119 EDVYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-EGHITEIIYKGAHNHPK 176
                        7****************************************.***************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MLRSSWMSGS SKLGLSCQII YKQSFPSIEV SVQSENSSQS IEPTKVQNQN TNNLQLQADF  60
SHTSTEKDNG ANSADPRAFD TVGGSTEHSP PLDEQPDEEG DQRGSGDSMA AAAGGTPSED  120
VYNWRKYGQK QVKGSEYPRS YYKCTHPNCQ VKKKVERSHE GHITEIIYKG AHNHPKPPPN  180
RRSAAIGSSN PLNDMRPDIP EQGGPQSGAD GDLVWASTQK ANVGAPDWKH ENLEVTSSAS  240
VGPDYCNQSS SMQAQNGTHL ESGDVVDASS TFSNDEDEDD RGTHGSVSLA YDGEGDESES  300
KRRLLLTSFY LLVNNLKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26440.15e-58WRKY family protein