PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1074400.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 24847.7 Da PI: 4.5987 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.4e-20 | 66 | 115 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +grW+AeIrdp+ r kr++lg+f+taeeAa +++a+ l+g Pd.00g1074400.m01 66 KFRGVRRRP-WGRWAAEIRDPT----RrKRVWLGTFDTAEEAATVYDRAAVLLKG 115 89*******.**********84....34*********************987766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MVKFSEQVTT MTKLITHENQ NSPVNPTNLP PKLVRIILTD ADATDSSSDE EDSGVRRVKR 60 HTRRNKFRGV RRRPWGRWAA EIRDPTRRKR VWLGTFDTAE EAATVYDRAA VLLKGPDAVT 120 NFPNAAMTEA TVVTDVVVPA AEESYGCGSS TPNEAATSPT SVLRYDELTP FDGFRYGEVD 180 AFGFDIDLPL SLPDIMLSNN NNFAHDEFGE FDVNDFWVDV IC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 56 | 74 | RRVKRHTRRNKFRGVRRRP |
2 | 59 | 77 | RRVKRHTRRNKFRGVRRRP |
3 | 71 | 90 | RRRPWGRWAAEIRDPTRRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 1e-28 | ERF family protein |