PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g107370.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 198aa MW: 22551.6 Da PI: 8.7996 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 56.6 | 8.6e-18 | 42 | 124 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA++vGF +r+ +s+ks+r+g+i++r + C + ++ +++ +r C+a++ +++ek g w+v+k+ ++HnH+l+ Pd.00g107370.m01 42 FYDDYASRVGFLTRVLSSRKSERDGSIISRGLGCRGVSDNGRKVM------QKECGQREFCTAMVLLRQEKPGSWVVKKFLKDHNHPLV 124 9*********************************87766666554......488999******************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MDDQNGTIYT SEGGETNIVE VSTNQEPYEG MLFESEDAAR VFYDDYASRV GFLTRVLSSR 60 KSERDGSIIS RGLGCRGVSD NGRKVMQKEC GQREFCTAMV LLRQEKPGSW VVKKFLKDHN 120 HPLVVQSQKS RRTLDEKDKK IQELTAQLRV KKRLSAAYRE QLLAFMKDVE DHNNHLSIKV 180 QSVFDNLKVL EAKAVGFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 8e-62 | FAR1 family protein |