PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g107310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 326aa    MW: 37384.2 Da    PI: 6.7047
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g107310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.92.6e-26146236190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY +Y+++ GF+vr++++++s+ n++++ ++fvCskeg+r+++  +++++    + ++tr gC+a++++ +++  kw+vtk+++eHnH+l+
  Pd.00g107310.m01 146 EFYVAYGRRSGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDR-VlpPPPVTREGCQAMIRLALRDGLKWVVTKFVKEHNHKLM 236
                       6******************************************99883332.245899********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MPIIKVKKPK TKDDFVGTKT TVTISPSRVF KDTPTTSCKI NHLGSWSGHG EIDLRLPLSS  60
NLGVGVWNIM DHQSVHGFDS DESDLDMHAE TYENNEGMED VLSENLDLCL DEKEGIAEPS  120
ADLPMNIEAL EPNIGMEFNS RDEAREFYVA YGRRSGFTVR IHHNRRSRVN NQVIGQDFVC  180
SKEGFRAKKY VHRKDRVLPP PPVTREGCQA MIRLALRDGL KWVVTKFVKE HNHKLMSPSK  240
VPWRGSGKHL ASEDEKDKRI RELSLELYNE RQKCKRRCAA YEEQLNLILK DLEKHTEHMS  300
KKVADIVQSI REIEEEQSED SDSGWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.17e-39FAR1 family protein