PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1072180.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 278aa MW: 31417.4 Da PI: 6.5118

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1072180.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.6e-09	205	239	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ Pd.00g1072180.m01 205 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 239 569*****************************885 PP
2	ELK	41.6	2.6e-14	159	180	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ Pd.00g1072180.m01 159 ELKGQLLRKYSGYLGSLKQEFM 180 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MDNNNSNHDG SSSSSSSVKA KIMAHPHYHR LLASYINCQK VGAPPEVVAR LEEACSSAAS 60 IGQMMSSSSG SGCLGEDPAL DQFMEAYCEM LTKYEQELSK PFKEAMIFLQ RIESQFKALT 120 LSSSSDSAVC GDGLDRNGSS EEEVDVNNNF IDPQAEDREL KGQLLRKYSG YLGSLKQEFM 180 KKRKKGKLPK EARQQLLDWW SRHYKWPYPS ESQKLALAES TGLDQKQINN WFINQRKRHW 240 KPSEDMQFVV MDATHPGHYY MDTVLGNPFP MDISPTLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	175	184	LKQEFMKKRK
2	181	185	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-142	TALE family protein