PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1071910.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 1121aa MW: 121957 Da PI: 7.0683

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1071910.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.8	3.1e-30	361	419	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Pd.00g1071910.m01 361 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 419 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1121 aa Download sequence
MDKGWGLTLD SDSFGFFLNK PPAAVKLDHH QNNSKRSNFF GGERMFPGIE FPVKLGGRED 60 QLAAPQPSIH DNNNRVVVDE VDFFSDRKNK NNTTTTDDHH QDMKSNGTIS VKKENWTGLD 120 VNTGLHLVTA NTGSDQSMVD DGISSDVDKK RAKNHELSQL QVELQRMNSE NLRLKEMLGQ 180 VTNNYGSLRM HVAAVMQQQQ QQQQNHTAAA DQSSQLNHEQ NVEAKSDQEK KQGLVPRQFL 240 NLGPRATAET DDQVSNSSSE ARTRSASPQN INEAASSKDH HLKKNDHPIG PLDPENSNNF 300 RDGKRVGREE SPESESQGWV PNKAPKLNNS AANKPIDQST EATMRKARVS VRARSEAPMI 360 TDGCQWRKYG QKMAKGNPCP RAYYRCTMAV GCPVRKQVQR CAEDRTILIT TYEGNHNHPL 420 PPAAMAMAST TTAAASMLLS GSMSSADGIM NPNNLLARAI LPCSSSVATI SASAPFPTVT 480 LDLTTTPLQF QRPQSQFQVP FPGQQPQLPQ SASFADTVSA ATAAITADPT FTAALAAAIT 540 SIIGGATFAD LPGPYFEWEK MDAAPVARLD AAAIRIKNLL FVFAGYGTVN FVFLHQLSLA 600 LFLFFCCEPA TIKPVNMGTI FKAVVLPLFL SSLLLSLVSS VPNDGLFRIG LKKVKLDPNS 660 RVAAQLESKN VEALRASMRK YHLPANLEDS GDIDIVSLKN YMDAQYYGEI AIGTPPQTFT 720 VIFDTGSANL WVPSSKCRFS VACYFHANYK SGKSSTYKKN GTSASIQYGT GAISVGDIVV 780 ENQDFIEATS EPGLIFLAAK FDGLLGLGFQ EISVGKAVPV WYNMIEQGLI KKPLFSFWLN 840 RNAQEEEGGE IVFGGVDPNH FKGKHTYVPV TKKGYWQFDM GDVLIGGKPT GYCSRGCFAV 900 ADSGTSLLAG PTTVITMINQ AIGAEGVVSQ ECKAVAQQYG QTIMNLLLAE ARPDKVCSQI 960 GLCTFDGTRS VSMGIESVVD KSNGKSSGIL HDASCSACEM AVVWMKNQLE QNQTQDRILN 1020 YVNELCERMP SPMGQSAVDC GRLSSMPSVS FTIGGKVFKL TPNEYILKVG EGPQAQCISG 1080 FTNIDIPPPR GPLWILGDIF MGRYHTVFDS GNMRVGFAEA A

Sequence ? help Back to Top

Protein Sequence Length: 1121 aa Download sequence

MDKGWGLTLD SDSFGFFLNK PPAAVKLDHH QNNSKRSNFF GGERMFPGIE FPVKLGGRED  60
QLAAPQPSIH DNNNRVVVDE VDFFSDRKNK NNTTTTDDHH QDMKSNGTIS VKKENWTGLD  120
VNTGLHLVTA NTGSDQSMVD DGISSDVDKK RAKNHELSQL QVELQRMNSE NLRLKEMLGQ  180
VTNNYGSLRM HVAAVMQQQQ QQQQNHTAAA DQSSQLNHEQ NVEAKSDQEK KQGLVPRQFL  240
NLGPRATAET DDQVSNSSSE ARTRSASPQN INEAASSKDH HLKKNDHPIG PLDPENSNNF  300
RDGKRVGREE SPESESQGWV PNKAPKLNNS AANKPIDQST EATMRKARVS VRARSEAPMI  360
TDGCQWRKYG QKMAKGNPCP RAYYRCTMAV GCPVRKQVQR CAEDRTILIT TYEGNHNHPL  420
PPAAMAMAST TTAAASMLLS GSMSSADGIM NPNNLLARAI LPCSSSVATI SASAPFPTVT  480
LDLTTTPLQF QRPQSQFQVP FPGQQPQLPQ SASFADTVSA ATAAITADPT FTAALAAAIT  540
SIIGGATFAD LPGPYFEWEK MDAAPVARLD AAAIRIKNLL FVFAGYGTVN FVFLHQLSLA  600
LFLFFCCEPA TIKPVNMGTI FKAVVLPLFL SSLLLSLVSS VPNDGLFRIG LKKVKLDPNS  660
RVAAQLESKN VEALRASMRK YHLPANLEDS GDIDIVSLKN YMDAQYYGEI AIGTPPQTFT  720
VIFDTGSANL WVPSSKCRFS VACYFHANYK SGKSSTYKKN GTSASIQYGT GAISVGDIVV  780
ENQDFIEATS EPGLIFLAAK FDGLLGLGFQ EISVGKAVPV WYNMIEQGLI KKPLFSFWLN  840
RNAQEEEGGE IVFGGVDPNH FKGKHTYVPV TKKGYWQFDM GDVLIGGKPT GYCSRGCFAV  900
ADSGTSLLAG PTTVITMINQ AIGAEGVVSQ ECKAVAQQYG QTIMNLLLAE ARPDKVCSQI  960
GLCTFDGTRS VSMGIESVVD KSNGKSSGIL HDASCSACEM AVVWMKNQLE QNQTQDRILN  1020
YVNELCERMP SPMGQSAVDC GRLSSMPSVS FTIGGKVFKL TPNEYILKVG EGPQAQCISG  1080
FTNIDIPPPR GPLWILGDIF MGRYHTVFDS GNMRVGFAEA A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-108	WRKY family protein