PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1071810.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 318aa MW: 35622.2 Da PI: 8.6621

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1071810.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.5	3.1e-33	65	118	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+ave+LGG+++AtPk +l++m+vkgLt++hvkSHLQ+YR+ Pd.00g1071810.m01 65 PRLRWTPDLHHCFVHAVERLGGEQRATPKMVLQIMNVKGLTISHVKSHLQMYRS 118 8****************************************************7 PP
2	Myb_DNA-binding	50.3	5.7e-16	66	117	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg+ t+k + + m+ kg+t ++ks++q+y+ Pd.00g1071810.m01 66 RLRWTPDLHHCFVHAVERLGGEqraTPKMVLQIMNvKGLTISHVKSHLQMYR 117 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MKSSLKGSPS SSVDNGDDDD HQAGQRLVLY HHLLAAADHH QRSGLQKSPS SSSTPVRPYV 60 RSKMPRLRWT PDLHHCFVHA VERLGGEQRA TPKMVLQIMN VKGLTISHVK SHLQMYRSMK 120 HEQGIQAAAM AAKKNGMFQA LEHSNNSNLL KPINSNQPRY FQNNDGMQNM YNYGPCQSNQ 180 TCYIEQLDLN TTSPLPKWKD ETKQAMWIEK KVTREQNPNS CIIFKDLLKR CTDAQESNDQ 240 GKAVSLVSAG CKSNHKEFED VLLCEESESS MRVVSNNDAR MSLSLNSSPK ASHELLRLSK 300 AAGNSDMNDV SLELTLST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-35	G2-like family protein