PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1069940.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 257aa MW: 27136 Da PI: 6.9851 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.2 | 0.00056 | 129 | 151 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H Pd.00g1069940.m01 129 YECKTCNRTFPSFQALGGHRASH 151 99**********99999998887 PP | |||||||
2 | zf-C2H2 | 13.6 | 0.0002 | 219 | 241 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H Pd.00g1069940.m01 219 HECSICGAEFTSGQALGGHMRRH 241 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MEAAGGGDHH HLHREEVIMG CKEQQHNNII IKGKRTKRLR PQSPIPFAIP TSSSSPEDGG 60 GGDGGGENDY INSATNLSPT TSAEFQDSTT EEEEDMANCL ILFLEATTAV GPTGAKAGAV 120 AAGGGCYAYE CKTCNRTFPS FQALGGHRAS HKRPKANTGD DQKNKHFAIG LLPSDEEDTQ 180 LFKNSILHNN NNTSSSPLSL HLSNRGLVLS SNKSSSKVHE CSICGAEFTS GQALGGHMRR 240 HRAPAAANTT LALTAPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04390.1 | 1e-36 | C2H2 family protein |