PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1069460.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 519aa MW: 58128.7 Da PI: 5.6363

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1069460.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.8	1.6e-10	70	110	7	48
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +Ed++l + + +G+++W+ Ia+++ +t qc+ rw++yl Pd.00g1069460.m01 70 QEDDILRNQISVHGTDNWAIIASKFK-DKTTRQCRRRWYTYL 110 7**********************9.***********97 PP
2	Myb_DNA-binding	43.5	7.4e-14	116	159	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + Pd.00g1069460.m01 116 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 159 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MNVKVSPTPN SLNPDRSFQP KSLFNSGDSE TLRKSNSKGA FEKLESEANQ SGHVIFLGFL 60 TWVGSFRELQ EDDILRNQIS VHGTDNWAII ASKFKDKTTR QCRRRWYTYL NSDFKKGGWS 120 PEEDMLLCEA QKIFGNRWTE IAKVVSGRTD NAVKNRFSTL CKKRAKYEAL AKENATSYIN 180 SNDKRVIIQN GFDTDGTTAP SKKMRRTHIP NLSENCNSGD RLFEQCGKMN QQLRAPFTVL 240 IQNFHNVDNL PDQHNVSSTK EVPGNAQNSK FQGSFLKKDD PKITALMQQA ELLSSLALKV 300 NTENTDQSLE NAWKVLQDFL NQSKESDILS YGITDFDFQL EDLKYLLEDL RSTNEGSRPS 360 WQQPDLYDES PGSSEYSTGS TLLSQTECYV EQNEAEIGTL IEEIQPGSQS IPIGGENDVR 420 ECEKGIVSSG TRKQEIFPSC NEGTKTDAVI SVSSNTEFSS PNQVTPLFRS LAAGIPSPKF 480 SESERSFLLK TLGVESPSPY PSNNPSRPPP CKRALLQSL

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MNVKVSPTPN SLNPDRSFQP KSLFNSGDSE TLRKSNSKGA FEKLESEANQ SGHVIFLGFL  60
TWVGSFRELQ EDDILRNQIS VHGTDNWAII ASKFKDKTTR QCRRRWYTYL NSDFKKGGWS  120
PEEDMLLCEA QKIFGNRWTE IAKVVSGRTD NAVKNRFSTL CKKRAKYEAL AKENATSYIN  180
SNDKRVIIQN GFDTDGTTAP SKKMRRTHIP NLSENCNSGD RLFEQCGKMN QQLRAPFTVL  240
IQNFHNVDNL PDQHNVSSTK EVPGNAQNSK FQGSFLKKDD PKITALMQQA ELLSSLALKV  300
NTENTDQSLE NAWKVLQDFL NQSKESDILS YGITDFDFQL EDLKYLLEDL RSTNEGSRPS  360
WQQPDLYDES PGSSEYSTGS TLLSQTECYV EQNEAEIGTL IEEIQPGSQS IPIGGENDVR  420
ECEKGIVSSG TRKQEIFPSC NEGTKTDAVI SVSSNTEFSS PNQVTPLFRS LAAGIPSPKF  480
SESERSFLLK TLGVESPSPY PSNNPSRPPP CKRALLQSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	1e-162	MYB family protein