PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1067840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 428aa    MW: 48197.4 Da    PI: 4.5149
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1067840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.61.1e-34211122102
                        HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS
       HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 
                        Fl+k ye+++d++ +++iswse+g+sfv++d+++f+  +LpkyFkhsnf+SF+RQLn+YgF+k+++++         w F+++ F +g+k+l
  Pd.00g1067840.m01  21 FLRKCYEMVDDNDADSIISWSETGDSFVIWDMTQFSILLLPKYFKHSNFSSFMRQLNIYGFRKIDSDR---------WVFANEGFIRGQKHL 103
                        9****************************************************************999.........*************** PP

                        XXXXXXXXX CS
       HSF_DNA-bind  94 lekikrkks 102
                        l++i r+k+
  Pd.00g1067840.m01 104 LKNISRRKH 112
                        ******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MLKSAGKSGD GSGSGGSVAP FLRKCYEMVD DNDADSIISW SETGDSFVIW DMTQFSILLL  60
PKYFKHSNFS SFMRQLNIYG FRKIDSDRWV FANEGFIRGQ KHLLKNISRR KHPQGSDQRK  120
ALQQKDNPDG PCENIVENGL WREVENLKTD KVALKQELVK LRQHQEISEN NLLLLRNRLR  180
GMEKNQQQML SFLVMAMQSP GFLVQLLQPK ENSWRIAEPG NMLEQGVDDG IPITSDGAIV  240
RYQPPVDEAP KPVLAANSGS DKQTEFDSYI DGMNDFVVNP DFMKMLMDEK LSSLENQAPY  300
TLPDISDDGA WEQLLLASPF LEDIEATKED GKETVDSRME VESTASELLE SQNFDTLIEQ  360
MKKSQNFPSE STVYGSNVES SQNLEHITEQ MGYLASDSNS KLNLTNILVG GMTVGKSILL  420
AVLLCFYM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67970.11e-103HSF family protein