PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1065460.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 316aa    MW: 34608.2 Da    PI: 5.0117
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1065460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.61.1e-22136184146
                        ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk 46 
                        ldDg++WrKYGqK++ g+++pr+YYrCt++    C ++k+v+rs+edp+
  Pd.00g1065460.m01 136 LDDGFSWRKYGQKDILGAKYPRGYYRCTHRnaqCCLATKQVQRSDEDPT 184
                        59***************************9876799***********86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MENCNMHGEK MSLINELAQG RELARQLQIH LNVPSSSHGT RESLVQKIIV SYEKALSMLN  60
SSSSASGGEQ QLPTGHAAIR MIESPPPSLN GSPLSEDSDR EFKDQDNKDS SRKRKTLPRW  120
TQQIRVTSGM GLEGPLDDGF SWRKYGQKDI LGAKYPRGYY RCTHRNAQCC LATKQVQRSD  180
EDPTNSMDIV DPQQNQQQPQ DLLLAIPQGL TVVTEGLDTG DQELFPYNPL NHNYVGHFSP  240
PFMGPATSGT QYFSASEQGF GGGSQSFQGA ECEIAEILSS STSATNSPAA LGFPFGQADQ  300
NLYPNFSFDG PGFFSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111116SRKRKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-38WRKY family protein