PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1065450.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 381aa    MW: 41448.6 Da    PI: 4.7785
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1065450.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.51.2e-13114164255
                        HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        r++h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YI++Lq
  Pd.00g1065450.m01 114 RMTHITVERNRRKQMNDHLSVLRSLMPCF---YVKRGDQASIIGGVVDYINELQ 164
                        99**************************9...9********************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MDDHDRPSSD FFQEQEQCYY SDTTCNLATP GDDLFSILES LDDGFGFGGA MEFPPPPATV  60
ARPTELVFSS SSADQTELDE TNSPPKTKRL KLSASPASGG TATTFSDEDG QQTRMTHITV  120
ERNRRKQMND HLSVLRSLMP CFYVKRGDQA SIIGGVVDYI NELQQVLQSL EAKKQRKAYS  180
EVLSSPMLAS SPRPPGPSPP VLSPRKPPLS PRLSLPPISP RTPQPTSPYK PSSARAMQQL  240
PPQLPAAANI ISNYLISSPN MPTSSSFELP SPSSSTTSSH INNNNNNIDN LNELFANSKS  300
AVAQVEVKFS GPNVLLKTVS PPIPGQALRI ISTLEELSLE ILDVSITTVD ETMINAFTIK  360
IGIECQLSAE ELAHQIQQTF C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114125RMTHITVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.18e-49bHLH family protein