PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1065450.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 381aa MW: 41448.6 Da PI: 4.7785 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.5 | 1.2e-13 | 114 | 164 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r++h +Er+RR+++N+ ++ Lr+l+P + k+ + a+i +v+YI++Lq Pd.00g1065450.m01 114 RMTHITVERNRRKQMNDHLSVLRSLMPCF---YVKRGDQASIIGGVVDYINELQ 164 99**************************9...9********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence |
MDDHDRPSSD FFQEQEQCYY SDTTCNLATP GDDLFSILES LDDGFGFGGA MEFPPPPATV 60 ARPTELVFSS SSADQTELDE TNSPPKTKRL KLSASPASGG TATTFSDEDG QQTRMTHITV 120 ERNRRKQMND HLSVLRSLMP CFYVKRGDQA SIIGGVVDYI NELQQVLQSL EAKKQRKAYS 180 EVLSSPMLAS SPRPPGPSPP VLSPRKPPLS PRLSLPPISP RTPQPTSPYK PSSARAMQQL 240 PPQLPAAANI ISNYLISSPN MPTSSSFELP SPSSSTTSSH INNNNNNIDN LNELFANSKS 300 AVAQVEVKFS GPNVLLKTVS PPIPGQALRI ISTLEELSLE ILDVSITTVD ETMINAFTIK 360 IGIECQLSAE ELAHQIQQTF C |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 114 | 125 | RMTHITVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53210.1 | 8e-49 | bHLH family protein |