PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g106530.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 580aa MW: 66027 Da PI: 8.3411

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g106530.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.5	1.2e-19	78	163	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfYn+YA+ vG s+r+sk +k+ + g+ +r f Cs egkre++k + + +++raetr gC a++k++ + ++k++vt+++ eH+H Pd.00g106530.m01 78 KFYNAYAYGVGLSIRRSKFHKE-KCGKLRDRLFFCSAEGKREKNKCD-GSVKSHRAETRFGCLARMKISCRLNDKYCVTEFVPEHTHV 163 6***************9998.6677**************99.9999*********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MINGENNYKD DDGTQASLKL IFETGVDFNA FAGSESNEEK FLETTEGNEN IELIHSNMQK 60 KLVPVIGMEF ETEEEAFKFY NAYAYGVGLS IRRSKFHKEK CGKLRDRLFF CSAEGKREKN 120 KCDGSVKSHR AETRFGCLAR MKISCRLNDK YCVTEFVPEH THVTSSPCKT HFFRSHRNMS 180 LAQIVEADIA DSSGIAPKAT LELLSRQAGG RQNLGFIPVD YKNYLRSKRT REMRRLVEDR 240 RYQELKAEFR ASQSSPALSF PVEILKYASN IYTPEVFKLF QDELCKAHDC VLKFNGEIGS 300 ISKYEVIPHK KYWHHTVTFD SIDNTVLCSC KKYEFAGILC AHALKVLSTR WTKNIKAKST 360 KSTCNVSSEN DSKVEIVRRY RELCRLHTQL ATRASESKDA YETAILGLNN TLRDVDACLK 420 KKASQEPTQV ISKTTSASKL NEYICIDDDI IKVRGIKTKT KVVGNSKRPK NALEKLTKKK 480 KPRNKEECAL LEQEPDSHNE TIHMPTQSQA TMDISQQYYI RTHNTLSNYQ QGPTSMMNLL 540 QAELPQEEEL SLLSSGGLDL LSSELTCSAK THDMDFQDVE

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MINGENNYKD DDGTQASLKL IFETGVDFNA FAGSESNEEK FLETTEGNEN IELIHSNMQK  60
KLVPVIGMEF ETEEEAFKFY NAYAYGVGLS IRRSKFHKEK CGKLRDRLFF CSAEGKREKN  120
KCDGSVKSHR AETRFGCLAR MKISCRLNDK YCVTEFVPEH THVTSSPCKT HFFRSHRNMS  180
LAQIVEADIA DSSGIAPKAT LELLSRQAGG RQNLGFIPVD YKNYLRSKRT REMRRLVEDR  240
RYQELKAEFR ASQSSPALSF PVEILKYASN IYTPEVFKLF QDELCKAHDC VLKFNGEIGS  300
ISKYEVIPHK KYWHHTVTFD SIDNTVLCSC KKYEFAGILC AHALKVLSTR WTKNIKAKST  360
KSTCNVSSEN DSKVEIVRRY RELCRLHTQL ATRASESKDA YETAILGLNN TLRDVDACLK  420
KKASQEPTQV ISKTTSASKL NEYICIDDDI IKVRGIKTKT KVVGNSKRPK NALEKLTKKK  480
KPRNKEECAL LEQEPDSHNE TIHMPTQSQA TMDISQQYYI RTHNTLSNYQ QGPTSMMNLL  540
QAELPQEEEL SLLSSGGLDL LSSELTCSAK THDMDFQDVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-24	FAR1 family protein