PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1063940.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 829aa MW: 93395.1 Da PI: 6.8025

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1063940.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.1	1.9e-25	232	316	3	88
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 Yn+YA+ vGF+vrk+ ++sk +g++++r+f+Cskeg+r+++k++ ++ +++r+etrtgC a++ ++++ dgk++vt++e++HnH Pd.00g1063940.m01 232 YNKYARLVGFNVRKDWVNRSKVHGQVVSRKFTCSKEGYRRKDKRD-VNVKKHRKETRTGCLAHMIITRQPDGKYRVTQFEEQHNHG 316 ****************************************999.999**********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 829 aa Download sequence
MGAFKSAVNS LSCFQAALVL VLLIATAETQ MAEAQSSSSC STELSSLNVC APFVVPGSTN 60 TNPSSDCCGA LQAVHPDCLC NTLRVAARLP AQCNLSPITC VRLKIRNWNR RIRATASSFR 120 LKVDFGCDIG AAWIGHWTFG WATLKFTRKH YCTRSMERED DDFGSLHEDS MDVRLQATNR 180 LDLNVEQDSR SPKVVYVNGT QSNPPSIGAD SKDSVLEVGT EFESDEHAYK SYNKYARLVG 240 FNVRKDWVNR SKVHGQVVSR KFTCSKEGYR RKDKRDVNVK KHRKETRTGC LAHMIITRQP 300 DGKYRVTQFE EQHNHGNVNS SIAQALPEQH NHDNVILSIA QALPLQRECT VPEAADADSV 360 KELGSLSKSA LDSMNRGFRN DWLKWMFRER EKWAVVYGRN TFFVDRKGSH LVESLFHDLR 420 NYLYSDLDVL DFVKYFERVV DEQRYKEIEA NDEMNRCMPR LMGNVILLKH ASDVYTSRAF 480 EVFQRGYEKC LNIVVNQCSE NGPLFEYKTN IFGKIREHTV TFNSSDDSVI CSCKKFDSVG 540 FLCSHALKVL DHMNIKVVPS KYILKRWTKD ARLGSAREND VSSIRDNPKL VVASRYKNMC 600 GRIIMLSAKA SESEEAFQFA VGQLDEVMEG VEKILTLKPQ DAQAFTSSST ANASDSERAV 660 IFPDGNAIED QDDNVVKGAK EKETAVFDKG QLTNVNGEFS STKRIQNVDT SLQNTDSCIS 720 SPSLYVSPEG TTANPIMQGL YNFEANQVVQ CMYQQDNLVM EEQTNPNMYQ PLNFFSNQHD 780 SPGHSQLLQE PLINGTYQEP VSSTPELRQA MDLDVQHAHS SSFLLLDRG

Sequence ? help Back to Top

Protein Sequence Length: 829 aa Download sequence

MGAFKSAVNS LSCFQAALVL VLLIATAETQ MAEAQSSSSC STELSSLNVC APFVVPGSTN  60
TNPSSDCCGA LQAVHPDCLC NTLRVAARLP AQCNLSPITC VRLKIRNWNR RIRATASSFR  120
LKVDFGCDIG AAWIGHWTFG WATLKFTRKH YCTRSMERED DDFGSLHEDS MDVRLQATNR  180
LDLNVEQDSR SPKVVYVNGT QSNPPSIGAD SKDSVLEVGT EFESDEHAYK SYNKYARLVG  240
FNVRKDWVNR SKVHGQVVSR KFTCSKEGYR RKDKRDVNVK KHRKETRTGC LAHMIITRQP  300
DGKYRVTQFE EQHNHGNVNS SIAQALPEQH NHDNVILSIA QALPLQRECT VPEAADADSV  360
KELGSLSKSA LDSMNRGFRN DWLKWMFRER EKWAVVYGRN TFFVDRKGSH LVESLFHDLR  420
NYLYSDLDVL DFVKYFERVV DEQRYKEIEA NDEMNRCMPR LMGNVILLKH ASDVYTSRAF  480
EVFQRGYEKC LNIVVNQCSE NGPLFEYKTN IFGKIREHTV TFNSSDDSVI CSCKKFDSVG  540
FLCSHALKVL DHMNIKVVPS KYILKRWTKD ARLGSAREND VSSIRDNPKL VVASRYKNMC  600
GRIIMLSAKA SESEEAFQFA VGQLDEVMEG VEKILTLKPQ DAQAFTSSST ANASDSERAV  660
IFPDGNAIED QDDNVVKGAK EKETAVFDKG QLTNVNGEFS STKRIQNVDT SLQNTDSCIS  720
SPSLYVSPEG TTANPIMQGL YNFEANQVVQ CMYQQDNLVM EEQTNPNMYQ PLNFFSNQHD  780
SPGHSQLLQE PLINGTYQEP VSSTPELRQA MDLDVQHAHS SSFLLLDRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-26	FAR1 family protein