PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1063530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 210aa    MW: 23253.6 Da    PI: 10.3461
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1063530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.21.4e-133991155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                       ++++h e+E++RR+++   ++ Lr++lP       ++K s ae   +Av+YIk+Lq
  Pd.00g1063530.m01 39 KKMMHREIEKKRRQEMAALYASLRSVLPLqY---IKGKRSLAEHMNEAVNYIKHLQ 91
                       6899*************************66...*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MDIGMFNNIN TGGQQRKSSL ALTLDSAENQ DKSNDDGKKK MMHREIEKKR RQEMAALYAS  60
LRSVLPLQYI KGKRSLAEHM NEAVNYIKHL QTRIKVLGRR RDELKIRTSS LPSSSASSST  120
SSTSPRVAVH PCFGGVEIVI SRGGSVEQGL VLSRLLKILL GQGLTVISCA TTQVNERLVY  180
TIQSEVSDLA WGDFSGLQQI LTESLTRFSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.19e-49bHLH family protein