PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1062160.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 478aa    MW: 52141.3 Da    PI: 4.6399
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1062160.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-18169219155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta +Aa a+++a+k+++g
  Pd.00g1062160.m01 169 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTALDAALAYDEAAKAMYG 219
                        56*****999.**********8...3.35************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
MKCSSNVTTT TAVAVAATPR RLSTPPGAKG DWNWNRLIFG LGFRRAVKVV VEGYDINLRS  60
FSQPDLSSQA ILSSEIVEKT INQSLSKLQG MGAYDQGSNG VALTLDSTRK RKTRSRRDGT  120
SVAETLEKWK EYNKQLESDN NEGKTRKVPA KGSKKGCMKG KGGPDNSRCN YRGVRQRTWG  180
KWVAEIREPN RGSRLWLGTF PTALDAALAY DEAAKAMYGP AARLNLPNVA NYSSWKESSQ  240
ETSSATTPSG SSAVATPGCS GSTTSSNHSE VCAEEDSKGF LDVKTENGEG ESAIHAWSNA  300
VNQALVKEET KDEFTEGYFH NDQPAVKPEA YVGDFNWAGG PYPGDYLENF TEEEVFDVDE  360
LLTPLDDTPV RNPEPEQGLG SDVGQPGCSG MHPYECDRPS NLSYQLQFPD AKLLGSLNHM  420
EQGPSGGEYN FDFLKRDDVT GEDDQGYYNL GLSDLGLGDF TGGTMQPEDG SYNFSMDM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108113TRKRKT
2111118RKTRSRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.15e-45ERF family protein