PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1060540.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 28705.1 Da PI: 6.9558 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.8 | 8.5e-21 | 137 | 187 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp + + r++lg+f+ta eAaka++ a+ kl+g Pd.00g1060540.m01 137 HYRGVRRRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAIEAAKAYDLAAFKLRG 187 7********.**********9...4334*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MATEHEETSA LELIRQHLLN EFTSMDSFIS GLHLCTSQIP QPQSSHLPSQ SKTNSTTSSD 60 QCFRISDFLL PEIDQDTQFE TKPQITHPKP PKHSTLSHRK PAINVAIPSP PVLSGDEPQN 120 PSSSNNVVVE ASETARHYRG VRRRPWGKYA AEIRDPNRRG SRVWLGTFDT AIEAAKAYDL 180 AAFKLRGSKA ILNFPLEAGK TAEAEQPLQT TVEQRGLLFV FQLIGRRLGE RSAASQQVDD 240 GSVCPVAVTV GDLSNFSSTW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 3e-42 | ERF family protein |