PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1059310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 288aa    MW: 32179.1 Da    PI: 10.2875
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1059310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.49.1e-1268118355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        ++h e+Er+RR+++ +  + Lr+llP  +   ++K s ++   +Av+YIk+Lq
  Pd.00g1059310.m01  68 MMHRENERQRRQEMGTLHASLRSLLPLEF--IKGKRSISDHMNEAVNYIKHLQ 118
                        68*************************65..*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MMFPLHQGKK LVFQTSSNPP QKHTISEDRI LGHAISTGKS RRRKLVAAFN YDMIDQNSND  60
HNKKKKMMMH RENERQRRQE MGTLHASLRS LLPLEFIKGK RSISDHMNEA VNYIKHLQSR  120
IKRLDAKRAE LKKCSNIIST TGTDHGATTG SSDGRSPSCL TVHPCCGGVQ IVISSRGFRS  180
TKDGLSLSFS ISRVLEVLLE QGLAVVSCVS SKGNDRLLHT IQCEVNDLES IDLSGLEQKL  240
AELVTPFSSR YINTKLRAEE VLPLLTHAIS LVVKDGWALP LEASIRNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.13e-46bHLH family protein