PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1059020.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 161aa MW: 16881.7 Da PI: 9.3746 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.1 | 3.2e-16 | 32 | 81 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r +++g+Wv+eIr+p++ ++r++lg++ +e+Aa+a++ a+ +l+g Pd.00g1059020.m01 32 PVYRGIR--SRSGKWVSEIREPRK---TTRIWLGTYAKPEMAAAAYDVAAIALKG 81 68****6..678*********843...5***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MADPYPHDRD CSSSPRPGPS GASTSSSPRG HPVYRGIRSR SGKWVSEIRE PRKTTRIWLG 60 TYAKPEMAAA AYDVAAIALK GPDTALNFPN SILTYPIPAS SAASDIRAAA ARAAQSRAEM 120 ISAGESGGRS EPGGGMLVSP PRISSDYSPG NSDGGENLWS Y |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 127 | 135 | GGRSEPGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 4e-24 | ERF family protein |