PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1058900.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 967aa MW: 109422 Da PI: 5.4208

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1058900.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.5	6e-20	179	252	3	77
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwe 77 Yn+YA+ vGF+vrk+ ++sk +g++++r+f+Cskeg+r+++k++ ++ +++r+etrtgC a++ ++++ dgk+ Pd.00g1058900.m01 179 YNKYARLVGFNVRKDWVNRSKVHGQVVSRKFTCSKEGYRRKDKRD-VNVKKHRKETRTGCLAHMIITRQPDGKYX 252 ****************************************999.999********************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 967 aa Download sequence
MGAFKSAVNS LSCFQAALVL VLLIATAETQ MAEAQSSSSC STELSSLNVC APFVVPGSTN 60 TNPSSDCCGA LQAVHPDCLC NTLRAIGCGQ LKFTRKHYCT RSMEREDDDF GSLHEDSMDV 120 GLQATNRLDL NVEQDSRSPK VVYVNGTQSN PPSIGADSKD SVLEVGTEFE SDEHAYKSYN 180 KYARLVGFNV RKDWVNRSKV HGQVVSRKFT CSKEGYRRKD KRDVNVKKHR KETRTGCLAH 240 MIITRQPDGK YXXXXLSIAQ ALPLQRECTV PEAADADSVK ELGSLSKSAL DSMNRGFRVR 300 ESVDSFALDF ENYLQSERTR DMKEGEVGRL LHYFQRQHFE NPSFFYAIQV DTDDKVSNIL 360 WGDDNMVSDY DHFGDVVCLD TVCRADKNRL PFVQFVGVNN HKQVVIFSAA LLYDDTVQSY 420 KWLFQTFLES MSGKKPKAIL TDQDAAMVEA INSVLPETDH RICTWQMCQN ALKHLNHLVK 480 DTESFANDFK SCIYDQKDED GFVYAWGNML DNYGLQQNDW LKWMFREREK WAVVYGRNTF 540 FVDRKGSHLV ESLFHDLRNY LYSDLDVLDF VKYFERVVDE QRYKEIEAND EMNRCMPRLM 600 GNVILLKHAS DVYTPRAFEV FQRGYEKCLN IVVNQCSENG PLFEYKTNIF GKSREHTVTF 660 NSSDDSVICS CKKFDSVGFL CSHALKVLDH MNIKVVPSKY ILKRWTKDAR LGSARENDVS 720 SIRDNPKLVV ASRYKNMCGR IILLSAKASE SEEAFQFAVG QLDEVMEGVE KILTLKPQDA 780 QAFTSSSTAN ASDSERAVIF PDGNAIEDQD DNVVKGAKEK ETAVFDKGQL TNVNGEFSST 840 KRIQNVDTSL QNTDSCISSP SLYVSPEGTT ANPIMQGLYN FEANQVVQCM YQQDNLVMEE 900 QTNPNMYQPL NYFSNQHDSP GHSQLLQEPL INGTYQEPVS STPELRQAMD LDVQHAHSSS 960 FLLLDRG

Sequence ? help Back to Top

Protein Sequence Length: 967 aa Download sequence

MGAFKSAVNS LSCFQAALVL VLLIATAETQ MAEAQSSSSC STELSSLNVC APFVVPGSTN  60
TNPSSDCCGA LQAVHPDCLC NTLRAIGCGQ LKFTRKHYCT RSMEREDDDF GSLHEDSMDV  120
GLQATNRLDL NVEQDSRSPK VVYVNGTQSN PPSIGADSKD SVLEVGTEFE SDEHAYKSYN  180
KYARLVGFNV RKDWVNRSKV HGQVVSRKFT CSKEGYRRKD KRDVNVKKHR KETRTGCLAH  240
MIITRQPDGK YXXXXLSIAQ ALPLQRECTV PEAADADSVK ELGSLSKSAL DSMNRGFRVR  300
ESVDSFALDF ENYLQSERTR DMKEGEVGRL LHYFQRQHFE NPSFFYAIQV DTDDKVSNIL  360
WGDDNMVSDY DHFGDVVCLD TVCRADKNRL PFVQFVGVNN HKQVVIFSAA LLYDDTVQSY  420
KWLFQTFLES MSGKKPKAIL TDQDAAMVEA INSVLPETDH RICTWQMCQN ALKHLNHLVK  480
DTESFANDFK SCIYDQKDED GFVYAWGNML DNYGLQQNDW LKWMFREREK WAVVYGRNTF  540
FVDRKGSHLV ESLFHDLRNY LYSDLDVLDF VKYFERVVDE QRYKEIEAND EMNRCMPRLM  600
GNVILLKHAS DVYTPRAFEV FQRGYEKCLN IVVNQCSENG PLFEYKTNIF GKSREHTVTF  660
NSSDDSVICS CKKFDSVGFL CSHALKVLDH MNIKVVPSKY ILKRWTKDAR LGSARENDVS  720
SIRDNPKLVV ASRYKNMCGR IILLSAKASE SEEAFQFAVG QLDEVMEGVE KILTLKPQDA  780
QAFTSSSTAN ASDSERAVIF PDGNAIEDQD DNVVKGAKEK ETAVFDKGQL TNVNGEFSST  840
KRIQNVDTSL QNTDSCISSP SLYVSPEGTT ANPIMQGLYN FEANQVVQCM YQQDNLVMEE  900
QTNPNMYQPL NYFSNQHDSP GHSQLLQEPL INGTYQEPVS STPELRQAMD LDVQHAHSSS  960
FLLLDRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-97	FAR1 family protein