PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1057730.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 334aa    MW: 36462.7 Da    PI: 8.3108
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1057730.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.22.6e-31189247259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+ dp+++++tY+g+Hnh+
  Pd.00g1057730.m01 189 ADLWAWRKYGQKPIKGSPHPRNYYRCSSSkGCSARKQVERSTADPNIFVVTYTGDHNHP 247
                        699************************998****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MADDWDLHAV VRSCKSATHT TTTNTSAAGA PTNPITPPSA EEEDPFWDWL KSEEETDPLF  60
SFPNLLEPRA SAFQELQHGQ HHLQQQQHHF LPTKTPASPH FNPAIFPPGF GEFHGQQQPL  120
LLPKPETQIL PQQLPTQQGF MRPRAMVPAL PPPLPREPFT MPINSPRPRK RKCQQKRQVC  180
QVSAENLSAD LWAWRKYGQK PIKGSPHPRN YYRCSSSKGC SARKQVERST ADPNIFVVTY  240
TGDHNHPRPT HRNSLAGSTR NKLSATAGQN QPINNDPAMP DEIFLGLKQL GCTSSSGSGG  300
SLAAGASGET FSDQEPSSLG SSWAAAGATV GGGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.14e-46WRKY family protein