PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1057270.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 371aa MW: 40385.4 Da PI: 4.8333 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.2 | 1.5e-13 | 119 | 169 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r++h +Er+RR+++N+ ++ Lr+l+P + k+ + a+i +v+YI++Lq Pd.00g1057270.m01 119 RMSHITVERNRRKQMNDHLSVLRSLMPCF---YVKRGDQASIIGGVVDYINELQ 169 99**************************9...9********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MDDHDRPSSD FFQEQEQCYY SDTTCNLATP GDDLFSILES LDDGFGFGGA MEFPPPPAMV 60 ALDNEQPPQP LVFSSSSADQ TELDETNSPP KTKRLKLSAS PASGGNATTF SDEDGQQTRM 120 SHITVERNRR KQMNDHLSVL RSLMPCFYVK RGDQASIIGG VVDYINELQQ VLQSLEAKKQ 180 RKAYSEVLSS PMLASSPRPP GPSPPVLSPR KPPLSPRLSL PPISPRTPQP TSPYKPSSAR 240 ALQQLPPQLP AAANIISNYL ISSPNMPTSS SFELPSPSSS TTSSHINNNN NIDNLNELFA 300 NSKSAVAQVE VKFSGPNVLL KTVSPPIPGQ ALRIISTLEE LSLEILDVSI TTVDETMINA 360 FTIKVFHFIC T |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 119 | 130 | RMSHITVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53210.1 | 2e-49 | bHLH family protein |