PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1054890.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 309aa    MW: 34174.9 Da    PI: 4.6366
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1054890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.97.2e-181461149
                NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                       + pGfrFhPtdeelv +yL++k++++ l++ e ik+vdiyk++PwdLpk
  Pd.00g1054890.m01 14 MLPGFRFHPTDEELVGFYLRRKIQQRLLPI-ELIKQVDIYKYDPWDLPK 61
                       579***************************.89**************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MDEKNDMDKI DDVMLPGFRF HPTDEELVGF YLRRKIQQRL LPIELIKQVD IYKYDPWDLP  60
KSAPPPKKLL DKSLPANDAW AICRIFKKTN SMAQRALSHS WGSPFQEPTA ASGLLNQGAH  120
CTQFSSENMS CTTDIGSSIQ FWSNNDLQQA SNASYTAFDT LPYKPINPTG SKPSIFDADQ  180
FPNSFMFSPG EMSGPISPAL IGDLSNTTGS IDFDGSQQQQ FSGFSINLSQ NQMQGNMETG  240
ENEGGFRKNL SSSTSHANNN NGQWGSIRPI AFPFSLASDD DAWKPTLPSD SPPCPSDMST  300
SYSTNKCYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.19e-24NAC family protein