PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1053050.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 186aa    MW: 21155.3 Da    PI: 9.096
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1053050.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67.3e-111567655
                       HHHHHHHHHHHHHHHHHHHCTSCC.C.....TTS-..STCHHHHHHHHHHHHHHH CS
                HLH  6 nerErrRRdriNsafeeLrellPk.as..kapskK..lsKaeiLekAveYIksLq 55
                       + +Er+RR ++++  ++L +l+P+  +  +++  K  ls  + L +A  YIk+L+
  Pd.00g1053050.m01 15 KTVERNRRIHMKDLCFKLASLIPPqHYkpSNS--KetLSQQDQLDLASSYIKQLR 67
                       679*********************55564444..336****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MKKCSGESSS KLDRKTVERN RRIHMKDLCF KLASLIPPQH YKPSNSKETL SQQDQLDLAS  60
SYIKQLRERI ENLKERKEKA MRSQLGIEAN STIDADNAMM VRSRLPVIEL RDSGSIIEVM  120
LISGLNKNFM LYEVIGVLEE EGAEVISASF STVGDKVFHS LHAQVKISRV GVETSTVWQR  180
LQDLIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.18e-33bHLH family protein