PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1052590.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

E2F/DP

Protein Properties

Length: 358aa MW: 40121.1 Da PI: 9.3807

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1052590.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	71.7	8.5e-23	20	85	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl l+++ + + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++wkg Pd.00g1052590.m01 20 RKQKSLGLLCSNFLGLYNRDGVTSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLARKAKNQYSWKG 85 79***************999********.....****************************98 PP
2	E2F_TDP	81.6	6.8e-26	151	231	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+e++++l++vak L+ + +++k+RRiYDi+NVL+++nliek ++k++++w g Pd.00g1052590.m01 151 RREKSLALLTQNFVKLFVCSTEEMISLDDVAKLLLGDaqsasAMRTKVRRIYDIANVLSSMNLIEKthtpdTRKPAFKWLG 231 689*****************************************************************99*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MATPAAPPSG PSTRKHGYSR KQKSLGLLCS NFLGLYNRDG VTSIGLDDAA SRLGVERRRI 60 YDIVNVLESV GVLARKAKNQ YSWKGFGAIP NALQELREEG LRENCINFAG NDDAKVSDDE 120 DDEERCGSQP NDKSNPTVNP QPPADQKPDN RREKSLALLT QNFVKLFVCS TEEMISLDDV 180 AKLLLGDAQS ASAMRTKVRR IYDIANVLSS MNLIEKTHTP DTRKPAFKWL GLRGKEENLV 240 PNESRKRAFG TDITNVISKR GKLESSIGGE LDAQKQRQHD LEDSKDGSKS YQFGPFAPVT 300 IARPGNSNMR RVHDWEKLTS TYRPQYQNQA LKDLFSHYME AWKSWYSEVA GKNPIRIS

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MATPAAPPSG PSTRKHGYSR KQKSLGLLCS NFLGLYNRDG VTSIGLDDAA SRLGVERRRI  60
YDIVNVLESV GVLARKAKNQ YSWKGFGAIP NALQELREEG LRENCINFAG NDDAKVSDDE  120
DDEERCGSQP NDKSNPTVNP QPPADQKPDN RREKSLALLT QNFVKLFVCS TEEMISLDDV  180
AKLLLGDAQS ASAMRTKVRR IYDIANVLSS MNLIEKTHTP DTRKPAFKWL GLRGKEENLV  240
PNESRKRAFG TDITNVISKR GKLESSIGGE LDAQKQRQHD LEDSKDGSKS YQFGPFAPVT  300
IARPGNSNMR RVHDWEKLTS TYRPQYQNQA LKDLFSHYME AWKSWYSEVA GKNPIRIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-138	E2F/DP family protein