PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1052430.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 298aa    MW: 32502.3 Da    PI: 9.1848
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1052430.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.92.7e-1488132347
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
  Pd.00g1052430.m01  88 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 132
                        8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MAGTCSTVEP AGAGEIMLFG VRVVVDSMRK SVSLNNLSQY EQPQEGSNNN SGNNTIAGKD  60
DVAGYASEND VVHNSAGNRE RERKRGVPWT EEEHKLFLLG LQKVGKGDWR GISRNFVKTR  120
TPTQVASHAQ KYFLRRSNHN RRRRRSSLFD ITTDTVTATP MDEQQVHHQN NTSQSHPLPP  180
PPPSEACNPS GFSMVPNFPL TVGPAVLPVP IENPMGNLTL GHGNLENNAS AKLVRPIALH  240
SAPHATAMSD LNLKSTMDTS TLTLNLSLSM DPRESSSRHS AFQAMPSFSN RDSIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.11e-58MYB_related family protein