PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1052320.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 279aa    MW: 29923.2 Da    PI: 6.2655
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1052320.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.2e-10160207455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Pd.00g1052320.m01 160 SHSLAERARREKISERMKLLQDLVPGC----NKVIGKALVLDEIINYIQSLQ 207
                        8*************************9....677*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDPPLINESS FSAANPSAYS LAEIWPFSGE PGGSGGGLGL RMVSLGGLGD SSVNRDGSLE  60
ESTVTEQSGG GGGRKRRDVS SEDESSKLVS TSSASGLKDS SGKRMKLARS QNENGGSKVE  120
VEESSAAGDN KPAEKSTKPS EPPKQDFIHV RARRGQATDS HSLAERARRE KISERMKLLQ  180
DLVPGCNKVI GKALVLDEII NYIQSLQHQV EFLSMKLEAV NSRMNMNPTI EAFPSKDFGA  240
QPFDGAGLLF GSHTPREYAQ GSHPEWLHMQ VGSSFERAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.11e-89bHLH family protein