PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1051800.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 936aa MW: 103021 Da PI: 7.0687

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1051800.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.5	3.6e-30	287	346	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+ Pd.00g1051800.m01 287 MNDGCQWRKYGQKIAKGNPCPRAYYRCTIApSCPVRKQVQRCAEDMSILITTYEGTHNHP 346 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 936 aa Download sequence
MEAPLGKSNS HEGSEKEEKR LELESSSLAD HDDQEAAGSK EDTLLKVGNG GSCQENNEMK 60 SSSPTQKDLS SSKQISTTSN MKVEPDHSMA STSSSRKEQD YQLESARAEM GEVREENQRL 120 KKYLDRITDE YQTLQMQLYD IQEKANKSKD VTIASTNNIS NHQDEESEMV SLSLGSFSSR 180 PKKDKKNKNR STSSQGKENE SDRESLSLGL DCKYEAPKSS ATTTEVPLSN SSPASSLEEV 240 PKEEAGETWP PKKVLKTARS VEDEVAQQNP VKKARVSVRA RCDTPTMNDG CQWRKYGQKI 300 AKGNPCPRAY YRCTIAPSCP VRKQVQRCAE DMSILITTYE GTHNHPLPMS ATAMASTTSA 360 AASMLLSGSS SSARSGLNPS VGATTTAAHD LHGYNFYLSD NSKSRFYIPN SSLSSSLPTI 420 TLDLTSNPPP PSSSSNPLSH FNKFSSSSNS SHQLHPPTSL NFGFNSESNT NMSWSNGFLS 480 YGAQLPPYNI NNKNQIGSLS SLGIRQQQQP LQNNIYQNYM HKNNLNPTPP PHPSQGASPH 540 QFQPDPIAAA TKAITADPSF QSALAAALSS IIGSNSNVGT AGTTGMLGNN NNQAGGGDNI 600 NMAQKFKWGD QFAGNRDLLE IRSSSKLAMS TPARKRLMRD FKRLQQDPPA GISGAPQDNN 660 IMLWNAVIFG PDDTPWDGGT FKLTLQFTED YPNKPPTVRF VSRMFHPNIY ADGSICLDIL 720 QNQWSPIYDV AAILTSIQSL LCDPNPNSPA NSEAARMFSE NKREYNRRIE TSWRFGAPGG 780 SKLAMSTPAR KRLMRDFKRL QQDPPAGISG APQDNNIMLW NAVIFGPDDT PWDGGTFKLT 840 LQFTEDYPNK PPTVRFVSRM FHPNIYADGS ICLDILQNQW SPIYDVAAIL TSIQSLLCDP 900 NPNSPANSEA ARMFSENKRE YNRRVREIVE QSWTAD

Sequence ? help Back to Top

Protein Sequence Length: 936 aa Download sequence

MEAPLGKSNS HEGSEKEEKR LELESSSLAD HDDQEAAGSK EDTLLKVGNG GSCQENNEMK  60
SSSPTQKDLS SSKQISTTSN MKVEPDHSMA STSSSRKEQD YQLESARAEM GEVREENQRL  120
KKYLDRITDE YQTLQMQLYD IQEKANKSKD VTIASTNNIS NHQDEESEMV SLSLGSFSSR  180
PKKDKKNKNR STSSQGKENE SDRESLSLGL DCKYEAPKSS ATTTEVPLSN SSPASSLEEV  240
PKEEAGETWP PKKVLKTARS VEDEVAQQNP VKKARVSVRA RCDTPTMNDG CQWRKYGQKI  300
AKGNPCPRAY YRCTIAPSCP VRKQVQRCAE DMSILITTYE GTHNHPLPMS ATAMASTTSA  360
AASMLLSGSS SSARSGLNPS VGATTTAAHD LHGYNFYLSD NSKSRFYIPN SSLSSSLPTI  420
TLDLTSNPPP PSSSSNPLSH FNKFSSSSNS SHQLHPPTSL NFGFNSESNT NMSWSNGFLS  480
YGAQLPPYNI NNKNQIGSLS SLGIRQQQQP LQNNIYQNYM HKNNLNPTPP PHPSQGASPH  540
QFQPDPIAAA TKAITADPSF QSALAAALSS IIGSNSNVGT AGTTGMLGNN NNQAGGGDNI  600
NMAQKFKWGD QFAGNRDLLE IRSSSKLAMS TPARKRLMRD FKRLQQDPPA GISGAPQDNN  660
IMLWNAVIFG PDDTPWDGGT FKLTLQFTED YPNKPPTVRF VSRMFHPNIY ADGSICLDIL  720
QNQWSPIYDV AAILTSIQSL LCDPNPNSPA NSEAARMFSE NKREYNRRIE TSWRFGAPGG  780
SKLAMSTPAR KRLMRDFKRL QQDPPAGISG APQDNNIMLW NAVIFGPDDT PWDGGTFKLT  840
LQFTEDYPNK PPTVRFVSRM FHPNIYADGS ICLDILQNQW SPIYDVAAIL TSIQSLLCDP  900
NPNSPANSEA ARMFSENKRE YNRRVREIVE QSWTAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-64	WRKY family protein