PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1051690.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 283aa    MW: 31450.4 Da    PI: 6.3139
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1051690.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.81.3e-0563112154
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        +r  + erE++ R++ N+ f eL + l  +    ++ + Ka+iL +A++ +k+L
  Pd.00g1051690.m01  63 KRIHKAEREKQKREHFNELFLELADALELN----QQNNGKASILCEATRLLKDL 112
                        688899*********************998....68899999******999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MPSVQLPYLH FQLQDIRPYS VHRDGYRIMG SQDPVPAADK ANVTEASVRG ACSGKKIQAK  60
IPKRIHKAER EKQKREHFNE LFLELADALE LNQQNNGKAS ILCEATRLLK DLIGQIEYLQ  120
KENASLLSES NYMTIEKNEL REDNSALETQ IEKLHSEIED KVVQSKPGLN AAPPCAELRP  180
EVASHFTGTS VSLPTQDPSL QQAPAVFVMP LCPDLQSYPL PDAAQLTSNT TSHVSKPHAR  240
YPTSVDSWPS QLLGEKPTAG KESRQLGNSS NICRSRETDP DNM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.23e-54bHLH family protein