PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1049580.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 362aa MW: 39683.8 Da PI: 4.7036 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.2 | 4e-10 | 286 | 326 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR++iN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq Pd.00g1049580.m01 286 RKRREKINERLRVLQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 326 9******************97.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence |
MEHIGVVAEG EWTSLSGMYT AEEVDFMAQL LGNFSSSNHP SGTSSMRVPD TFWPGDESLT 60 MNMSGNHEGS HYSSETSISD CSNRILFPTS SNESYYLSSD SHPMLVTSNS SMSIDFGSGD 120 GIRNLNSYLI EVNDQCLNQE PSEGNAEEYG GNQPEAVALG KRRYDMAVQE PAMDDKSNTS 180 KDSMKITQSA ENMNKRNIKS KKSLQIITSN NEEDGNAGPN RQSSSSCCSG DDSNIALQSH 240 ENSQELSPGS TSTSSLSPKE ASALNLSGKS RARRGSAIDP QSLYARKRRE KINERLRVLQ 300 NLVPNGTKVD ISTMLEEAVH YVKFLQLQIK LLSSDDMWMY APICYNGMDL GLDLKLTSPK 360 QS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 286 | 291 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33880.1 | 1e-58 | bHLH family protein |