PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1049570.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 357aa MW: 39594.5 Da PI: 4.9346

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1049570.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.5	6.3e-10	287	327	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR++iN ++ L+ l+P+ +K++ +++Le+Av+Y+k Lq Pd.00g1049570.m01 287 RKRREKINARLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 327 9****************97.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MEDAGWSSHG GMYTSDEEAD FMSQLLANCS VTNEMNEASS SSIPFAICPS HGYSTTNRED 60 IDQGSHYFSD FANLYFSNGI DTYGTANNGS YYTSDSHQIM PTNYHNSETS RGLWDANGAN 120 LFLSQGEQFG MDHHQELRNG NVEEHCNTNQ TGAAFSETLL QLKRESQHEM RIRETEMEIE 180 VMVPENSKKR PCSSVEVQKK KRNVKSKKGQ KPVLTGDIED NDASTKGQSS SSTSCSGDED 240 SNASHQDLSG GVSPSNLSPK GLEDLNLNCQ KKASRGSATD SQSIYARKRR EKINARLRIL 300 QNLVPNGTKV DISTMLEEAV QYVKFLQLQI KLLSSDDMWM YAPIVYNGIN IGIELNS

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MEDAGWSSHG GMYTSDEEAD FMSQLLANCS VTNEMNEASS SSIPFAICPS HGYSTTNRED  60
IDQGSHYFSD FANLYFSNGI DTYGTANNGS YYTSDSHQIM PTNYHNSETS RGLWDANGAN  120
LFLSQGEQFG MDHHQELRNG NVEEHCNTNQ TGAAFSETLL QLKRESQHEM RIRETEMEIE  180
VMVPENSKKR PCSSVEVQKK KRNVKSKKGQ KPVLTGDIED NDASTKGQSS SSTSCSGDED  240
SNASHQDLSG GVSPSNLSPK GLEDLNLNCQ KKASRGSATD SQSIYARKRR EKINARLRIL  300
QNLVPNGTKV DISTMLEEAV QYVKFLQLQI KLLSSDDMWM YAPIVYNGIN IGIELNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	202	KKRPCSSVEVQKKKR
2	287	292	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G14760.1	3e-49	bHLH family protein