PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1047310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 358aa    MW: 39763.2 Da    PI: 4.7522
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1047310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.94.3e-28128189159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                        ldDgy+WrKYGqK++ g+++pr+YYrCt++   gC ++k+v++++ dp+++++tY+geH+++
  Pd.00g1047310.m01 128 LDDGYSWRKYGQKDILGATYPRGYYRCTHRgtrGCLATKQVQKADADPSTMVVTYRGEHTCS 189
                        59***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MEKRKSMEWE QKTLTSELTQ GKELAEQLMN YLHPSASQEK RDFLISKILF SYEKALSLLK  60
RDVGSDGESN HILNTMLESP TSFGNGSPMS EISDQDCKNK NVFKKRKTMP RWTEEVKVCS  120
GTGLDGSLDD GYSWRKYGQK DILGATYPRG YYRCTHRGTR GCLATKQVQK ADADPSTMVV  180
TYRGEHTCSQ VLQLARSSAL SLAKQASTGN QNATREAEKP KASQEMSFSF GAGLRVKTED  240
LDTREDDIFP SFSFPSTPIE PENVGDHIFC ATLMENDLMD GYSPTFASPA ATFEPDYLQA  300
TSSFGLGLDY VQTSESGLSE IISAPTSVTN SPIGDFGFSL DDLDFHHFEN PESFAYES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.15e-43WRKY family protein