PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g104730.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 313aa MW: 35429.9 Da PI: 4.7866 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.2 | 9.2e-30 | 128 | 185 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 +D ++WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers ++p++++itY+ eHnh Pd.00g104730.m01 128 SDVWAWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSCSNPETFIITYTAEHNH 185 79*************************998**************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MENWDLQAVV RGCNTTANID EAMENSQIPY CFAPLSIEEE DDFFHALPQL FEATAALDEL 60 EELYKPFYPV LQPSTPPIIL ASSMSVPQEA ITVEVPKKLK ESSTICKKIR KNQSKRVMKE 120 VRAEDLFSDV WAWRKYGQKP IKGSPYPRSY YRCSSSKGCS ARKQVERSCS NPETFIITYT 180 AEHNHVHPTR RNSLAGSTRS KFPSSKNKDK CKSSLNSPAM TNLAASIEED HDVQSASTNA 240 VKEEAQLLLE EVEISHENVM LDVMLSDEMI PSFEDLDREL EPVMDGWFLD QFSDNFPSPW 300 FNIVHSNTVT GAC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23550.1 | 2e-39 | WRKY family protein |