PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1046080.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 277aa    MW: 31813.7 Da    PI: 7.0637
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1046080.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.28.8e-09173221247
                        SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 
                        ++WT+eE+++++d vk  ++      W+ I + ++ ++++ +++s+++++
  Pd.00g1046080.m01 173 LSWTAEEEKKFKDIVKSNPPSlgitFWDQIFKSFP-KKSRRELVSYYFNV 221
                        58*****************88**************.9**********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MHPSLYDDHF SSSYNLRERL RLEKKLLSGG TMPQSRTGSE SSSPSYSPDM AGMEDQLLGN  60
SDFTGVLDRY PPSHIPLGSN YQAHLPEWTG EASESELKWL GSMFWPLEKP EHRYLIERDP  120
IGKGRQESCG CQVSGSIECV RFHISEKRLR VKLELGPAFY HWEFNQMGEE VGLSWTAEEE  180
KKFKDIVKSN PPSLGITFWD QIFKSFPKKS RRELVSYYFN VFLLHRRGYQ NRFTPNNIDS  240
DDEGLESGSV TNGFGDEERK PSKSILKSPH KPHAKCR