PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1044950.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | YABBY | ||||||||
Protein Properties | Length: 185aa MW: 21094.7 Da PI: 5.6383 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 152.2 | 4.6e-47 | 3 | 135 | 34 | 169 |
YABBY 34 vvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPek 121 vtvrCGhC+ llsvn++kas +lla+ + de+ +e lee ++++ + +++ s+s vs+ +++e+ ++ p v++PPek Pd.00g1044950.m01 3 AVTVRCGHCSCLLSVNMMKASfvplHLLASLTQ-DEQREELCLEEVDKQNN--NPLDMR--SPSMVVSN--SDNEEEGTISMNPIVNKPPEK 87 69****************999666666666665.44444444444443333..333333..33333333..13445555666666******* PP YABBY 122 rqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 rqr+Psayn fikeei+r+ka+nP+++h+eafs+aaknWa fP+i ++ Pd.00g1044950.m01 88 RQRAPSAYNHFIKEEIRRLKAENPSMTHKEAFSTAAKNWAQFPPIQYK 135 ********************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MLAVTVRCGH CSCLLSVNMM KASFVPLHLL ASLTQDEQRE ELCLEEVDKQ NNNPLDMRSP 60 SMVVSNSDNE EEGTISMNPI VNKPPEKRQR APSAYNHFIK EEIRRLKAEN PSMTHKEAFS 120 TAAKNWAQFP PIQYKGDGPD GESCTNQREE NVTWDSDVPE AHEDGKIFRE RKAPRHSIWA 180 RTPFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 4e-58 | YABBY family protein |