PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1044160.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 242aa MW: 27474.3 Da PI: 5.2915 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.9 | 1.9e-13 | 54 | 96 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 Er+RR+++N++++ Lr ++Pk + K++Ka+i + A++YI++L Pd.00g1044160.m01 54 VSERNRRKKLNERLFALRAVVPKiS------KMDKASIIKDAIDYIQEL 96 57*********************66......****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MDNIGDEYKH YWETNMFLQT EELDSWGLDE AFSGYYDSSS PDGGASSMAS KNIVSERNRR 60 KKLNERLFAL RAVVPKISKM DKASIIKDAI DYIQELHEQE RRIQTEIGEL ESGRSKKNMG 120 SEFDQELPVL LRSKKKKIEQ LYDSGGSRTS TIEVLELRVT YMGEKTVVAS LTCSKRTDTM 180 VKLCEVFESL KLKIITANVT AFSGRVLKTV FIEADEEEKD HLKIKIETAI AALNDPQSPM 240 SI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 3e-88 | bHLH family protein |