PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1043230.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 859aa MW: 95919.2 Da PI: 7.3127

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1043230.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	162.3	8.8e-51	21	122	18	118
CG-1 18 Le.nfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelek 108 L+ f+k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYah+een++fqrr+yw+Le++l + Pd.00g1043230.m01 21 LIvWFRKFHISSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEQDLMH 112 44389************************************************************************************* PP CG-1 109 ivlvhylevk 118 iv+vhylevk Pd.00g1043230.m01 113 IVFVHYLEVK 122 *****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 859 aa Download sequence
MAERGSYSQG PRLGHFLARF LIVWFRKFHI SSEPPNRPPS GSLFLFDRKV LRYFRKDGHN 60 WRKKKDGKTV KEAHEKLKVG SVDVLHCYYA HGEENENFQR RSYWMLEQDL MHIVFVHYLE 120 VKGNRANAGG IREIDEVTPD LQKGSSWTSS PSNSNCRTPS GNTDYTSPSS NLTSCEDADS 180 GDSRQASSFQ SSFDSQQMGN GPLTDKADIN LSLHPHLNNH DGPSSFHGGN YRPYFEKDQQ 240 CYSDDSTCGI DSQKTLGVGS WEEILGQCTT GLHTVTSHGS KSSIQIALAG IPPEQQNITS 300 TEFLAGNSTL KEEFGIPLPF RTNWQILEGI SLYVRVGAGQ VPFYVTCSNR LACSEVREFE 360 YQVGSTKDLD ITNICNATTN DIHLHLRLES LLSLRSVSPS GQLVEGVKEK QNLISKIISL 420 KEEEEYLPLV EPTAVNDLLQ HEGMEHLIKL MKEKLYSWLL HKAIEDGKGP SVLDSEGQGV 480 IHLAAALGYD WAIKPIVTAG VSINFRDVNG WTALHWAAFY GREQTVAILI SLGAAPGALT 540 DPSPEFPLGR APADLASVNR HKGISGFLAE SSLTSYLDSL TMNDAKEGGA AEISGIRAVK 600 TFSERIATPG SYSDMPDALS LKDSLTAVTN ATQAADRIHQ MFRMQSFDRR QLTEYDTDEF 660 GMPDERAISL IASKSHKVGP VNGHTAAIQI QKKFRGWKKR KEFLIIRQRI VKIQAHVRGH 720 QVRKQYKAIT WSVGILEKVI LRWRRKGTGL RGFRPDAVAK APNLQSVPSK DDDYDFLKKG 780 RKQTEERLQK ALTRVKSMVQ YPEGRAQYRR LLNVVEGFRE TKVSDMATDG SELKVEGGDD 840 LIDIDKLLDD DTFMSIAFD

Sequence ? help Back to Top

Protein Sequence Length: 859 aa Download sequence

MAERGSYSQG PRLGHFLARF LIVWFRKFHI SSEPPNRPPS GSLFLFDRKV LRYFRKDGHN  60
WRKKKDGKTV KEAHEKLKVG SVDVLHCYYA HGEENENFQR RSYWMLEQDL MHIVFVHYLE  120
VKGNRANAGG IREIDEVTPD LQKGSSWTSS PSNSNCRTPS GNTDYTSPSS NLTSCEDADS  180
GDSRQASSFQ SSFDSQQMGN GPLTDKADIN LSLHPHLNNH DGPSSFHGGN YRPYFEKDQQ  240
CYSDDSTCGI DSQKTLGVGS WEEILGQCTT GLHTVTSHGS KSSIQIALAG IPPEQQNITS  300
TEFLAGNSTL KEEFGIPLPF RTNWQILEGI SLYVRVGAGQ VPFYVTCSNR LACSEVREFE  360
YQVGSTKDLD ITNICNATTN DIHLHLRLES LLSLRSVSPS GQLVEGVKEK QNLISKIISL  420
KEEEEYLPLV EPTAVNDLLQ HEGMEHLIKL MKEKLYSWLL HKAIEDGKGP SVLDSEGQGV  480
IHLAAALGYD WAIKPIVTAG VSINFRDVNG WTALHWAAFY GREQTVAILI SLGAAPGALT  540
DPSPEFPLGR APADLASVNR HKGISGFLAE SSLTSYLDSL TMNDAKEGGA AEISGIRAVK  600
TFSERIATPG SYSDMPDALS LKDSLTAVTN ATQAADRIHQ MFRMQSFDRR QLTEYDTDEF  660
GMPDERAISL IASKSHKVGP VNGHTAAIQI QKKFRGWKKR KEFLIIRQRI VKIQAHVRGH  720
QVRKQYKAIT WSVGILEKVI LRWRRKGTGL RGFRPDAVAK APNLQSVPSK DDDYDFLKKG  780
RKQTEERLQK ALTRVKSMVQ YPEGRAQYRR LLNVVEGFRE TKVSDMATDG SELKVEGGDD  840
LIDIDKLLDD DTFMSIAFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein