PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1042180.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family BES1
Protein Properties Length: 297aa    MW: 31209.8 Da    PI: 5.3183
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1042180.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82238.93.1e-124812072150
             DUF822  72 gskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                        g+kp ++++++g s+sasp+ss+q        +sp++sy++sp+sssfpsp+++  + + +a  +sl+p+l++ls+ sss+
  Pd.00g1042180.m01  48 GCKPVDRMDIMGGSTSASPCSSYQ--------PSPCQSYNPSPASSSFPSPARYPANANGNAdaNSLIPWLKTLSSGSSSA 120
                        89**********************........*********************99887665566**********9977765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MRLSIAGIRV SVEDLLCLCF VIPKTATSPA STRWETTRAI WSFDTQWGCK PVDRMDIMGG  60
STSASPCSSY QPSPCQSYNP SPASSSFPSP ARYPANANGN ADANSLIPWL KTLSSGSSSA  120
TSKLPQLFIQ GGSISAPVTP PLSSPTSRTP RTKSDWDEAV AGSNWAGQNY PFLPSSTPPS  180
PGRQVLPDSG WLAGLQIPQS GPSSPTFSLV SRNPFNLKEA LSGGGSRMWT PGQSGTCSPV  240
VAASVDHSGD VPMSDGMAAE FAFGSNTSGL VKPWEGERIE ECVSDDLELT LGSARTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18890.11e-55BES1 family protein