PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1042010.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 221aa    MW: 24110.5 Da    PI: 4.5695
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1042010.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.73.2e-2569117249
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEE CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvve 49 
                        +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++++
  Pd.00g1042010.m01  69 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPSMLT 117
                        69*************************998***************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MSDQEENDNT TSSTPENSSG SPPPPSTNFS DFSKITSTSS PKKSARRAIQ KRVVSIPIKG  60
DNSNTPPPSD SWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR VDPSMLTEAP  120
EAQQPEHQDH DPTFADLNNE SLLTHDEFGW FADMETTSST VLESPIFAES GCAGGADSAD  180
MAAMVFPMGE EDESLFADLG ELPECSLVFR HRGVGPQVQI C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-62WRKY family protein