PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1041570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 162aa    MW: 18139.7 Da    PI: 9.2009
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1041570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.33.4e-3843101260
             zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                        ++++++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvPvG+grrk k 
  Pd.00g1041570.m01  43 PDRIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKP 101
                        67899***************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MAEVQNGQDV PGIKLFGTTI TLQNRSQVKE EPNKADQTAE KRPDRIIPCP RCKSMETKFC  60
YFNNYNVNQP RHFCKGCQRY WTAGGALRNV PVGAGRRKTK PPCRGLAGFP EACIYEGSEV  120
VHQFELDGVM EEWHVTAAQG GFRQVFPVVK RRRSCSGGQA CS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29160.14e-62Dof family protein