PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1041440.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 26622.3 Da PI: 9.6418 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.9 | 5.5e-11 | 57 | 103 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr l+P +K++Ka+ L ++ +k+L Pd.00g1041440.m01 57 KNHSEAERRRRERINAHLSTLRGLVPCT-----EKMDKAALLATVISQVKEL 103 58*************************8.....7********9999888777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MTKPTRSVTA TTTATIINTL LSNKAALVHS EKGELVKAPA RVGKKGVSEA KALAALKNHS 60 EAERRRRERI NAHLSTLRGL VPCTEKMDKA ALLATVISQV KELKKDALES SKGFLIPVDA 120 DEVQVEPYDT GAGDGTISVR ASVCCEYRSE LLSDLREALD SLHLKMVKAD IATLGNRVKN 180 VFVFTSCKER SNDADADAFQ LLASSVHQAL SSVLDKASAS PEYSPRTTLL SKRRRVSYFD 240 TSSSSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 63 | 68 | ERRRRE |
2 | 232 | 236 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41130.1 | 2e-35 | bHLH family protein |