PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1038040.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 205aa    MW: 22469.9 Da    PI: 4.257
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1038040.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.12.5e-142441055
                AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       +++g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  Pd.00g1038040.m01  2 RSWGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 44
                       57**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MRSWGSWVSE IRAPNQKTRI WLGSYSTAEA AARAYDAALL CLKGSSANLN FPSTASSHFI  60
PQEITIMSPK SIQRVAAAAA NSFAIDNATN PTTTNIASPP SPPPQSSSSS SLVSSPSMSS  120
SPSNNLLDDD MSSLMGSFEP YTPTYDHHHQ AIDQLPMSSM EPWNNFDDGL QSPKYMDQMF  180
NGAFFDPPMI YDFYEESDIP LWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.18e-31ERF family protein