PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1037740.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 360aa MW: 39257.1 Da PI: 8.6282 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.1 | 6.5e-05 | 124 | 146 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg+ F +nL+ H+ + H Pd.00g1037740.m01 124 SCPECGEIFMKAENLELHQAVrH 146 8******************9888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence |
MEESNAAKKS KKMRCSGSLC NNTKIMHRPE IGSPEVHKKR ASMGSSNSNE TSSRSMKAPL 60 HELNGVVSTS SSSLSAVSNN SSVGAGSFRA MPFRRFSGCY ECRMVVDPVL GFARDPSLRG 120 SICSCPECGE IFMKAENLEL HQAVRHAVSE LGPEDTSKNI VEIIFQSSWL KKQTPICKID 180 RILKVHNTQK TISKFEEYRE SIKAKATKLP KKHPRCIADG NELLRFHSTT FVCSLGLNCS 240 SNLCNSIPHC NICSIIKNGF DKFSGDLIED GILTTATSGR AHDKAVVAAE DSGKRAMLVC 300 RVIAGRVKKN MEDSIGIGPI GMEEYDSVAG AVGVYSNLDE LYVFNPKAIL PCFVVIYGGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75710.1 | 1e-102 | C2H2 family protein |