PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1036810.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 364aa MW: 41664.6 Da PI: 5.0296

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1036810.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.4	1.5e-35	44	135	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 Fl+k++++++d+++++++sws+ g sfvv+d+++f ++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+l Pd.00g1036810.m01 44 FLTKTFDMVDDPSTNRIVSWSRGGGSFVVWDPHTFVMNLLPRYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFVRGQKHL 126 9**************************************************************999.........*********** PP XXXXXXXXX CS HSF_DNA-bind 94 lekikrkks 102 l++ikrkk+ Pd.00g1036810.m01 127 LKNIKRKKT 135 *****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MNYLYPVKEE FPGSSSSQSG PGDPVEMIPP QPMEGLNDTG PPPFLTKTFD MVDDPSTNRI 60 VSWSRGGGSF VVWDPHTFVM NLLPRYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFV 120 RGQKHLLKNI KRKKTPSQPL PAQQALGPCV EVGRFGLDGE IDRLRRDKQV LMMELVKLRQ 180 QQQNTRAYLQ AMEQRLQGIE MKQQQMMAFL ARAMQNPAFM QQLVQQKDKR KELEEAMTKK 240 RRRPIDQGPS GVGGGKSSLK GKGTNFIKCE PLEFGDCDYE MSELEALALE MQGFGKARKE 300 LDEELEPLES GKEFDEGFWE ELFSERFEGD FSIPSAIVEE DEDVAGIAWT ESVLVFMMIY 360 LKIC

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MNYLYPVKEE FPGSSSSQSG PGDPVEMIPP QPMEGLNDTG PPPFLTKTFD MVDDPSTNRI  60
VSWSRGGGSF VVWDPHTFVM NLLPRYFKHN NFSSFVRQLN TYGFRKVDPD RWEFANEGFV  120
RGQKHLLKNI KRKKTPSQPL PAQQALGPCV EVGRFGLDGE IDRLRRDKQV LMMELVKLRQ  180
QQQNTRAYLQ AMEQRLQGIE MKQQQMMAFL ARAMQNPAFM QQLVQQKDKR KELEEAMTKK  240
RRRPIDQGPS GVGGGKSSLK GKGTNFIKCE PLEFGDCDYE MSELEALALE MQGFGKARKE  300
LDEELEPLES GKEFDEGFWE ELFSERFEGD FSIPSAIVEE DEDVAGIAWT ESVLVFMMIY  360
LKIC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	229	243	KRKELEEAMTKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-116	HSF family protein