PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1036230.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 645aa MW: 71995.8 Da PI: 7.341

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1036230.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.2	1.2e-12	353	399	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Pd.00g1036230.m01 353 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 399 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 645 aa Download sequence
MGEKFWVNEE DRVMVESVLG TEACQFLTSL VSENVFTDLV RPPGKLGVQQ GLSQLVKGSN 60 WNYAIFWQVV GSKSGGSALI WGDGHCRDTK DGGVAGENSS LDGSFEGVQK KEEVKKWVLE 120 KLHACFGGLD EGYARRLDGV SDVEMFYLTS MYYAFQLDSH SGPGESYKSG KSIWVSDVGG 180 CLHHYQSRSY LARLAGFQTV VFVPMKSGVV ELGSVKANPE EQNLVNMVRN LFGESSSVQA 240 KAFPMIFGRE LSLGGPKSQS INIAFSPKIE EDSTFPPESF ELQSVGTSNG CQSEDSEVKL 300 FPQLNQMMVG GFSAPTIVSS SELPKDESSA QIDERKPRKR GRKPANGREE PLNHVEAERQ 360 RREKLNQRFY ALRAVVPNIS KMDKASLLGD AITYITDLQM KIRVMETENQ MGNNSQKQFP 420 VPEIDFQERH EDAVVRMNCP LDSHPVSEVI NTLREHKIVA QESNVSITDN DKVIHTFSIP 480 TEGGDAEQLK EKLSLQTSIE GGTKSLVNKL KVIRDYVSQW PILVRVLYRV LVDKFLAPFR 540 TISNVRCSDQ RSWKNDHGEE FLFVSSKSQR MRFCFRKTQL FSTLVVLLIL FSCLQLGEMR 600 HLKAEQWAKN HGLVLVSQYL ARGKAPPSGP NPCTHIPGRS SGICT

Sequence ? help Back to Top

Protein Sequence Length: 645 aa Download sequence

MGEKFWVNEE DRVMVESVLG TEACQFLTSL VSENVFTDLV RPPGKLGVQQ GLSQLVKGSN  60
WNYAIFWQVV GSKSGGSALI WGDGHCRDTK DGGVAGENSS LDGSFEGVQK KEEVKKWVLE  120
KLHACFGGLD EGYARRLDGV SDVEMFYLTS MYYAFQLDSH SGPGESYKSG KSIWVSDVGG  180
CLHHYQSRSY LARLAGFQTV VFVPMKSGVV ELGSVKANPE EQNLVNMVRN LFGESSSVQA  240
KAFPMIFGRE LSLGGPKSQS INIAFSPKIE EDSTFPPESF ELQSVGTSNG CQSEDSEVKL  300
FPQLNQMMVG GFSAPTIVSS SELPKDESSA QIDERKPRKR GRKPANGREE PLNHVEAERQ  360
RREKLNQRFY ALRAVVPNIS KMDKASLLGD AITYITDLQM KIRVMETENQ MGNNSQKQFP  420
VPEIDFQERH EDAVVRMNCP LDSHPVSEVI NTLREHKIVA QESNVSITDN DKVIHTFSIP  480
TEGGDAEQLK EKLSLQTSIE GGTKSLVNKL KVIRDYVSQW PILVRVLYRV LVDKFLAPFR  540
TISNVRCSDQ RSWKNDHGEE FLFVSSKSQR MRFCFRKTQL FSTLVVLLIL FSCLQLGEMR  600
HLKAEQWAKN HGLVLVSQYL ARGKAPPSGP NPCTHIPGRS SGICT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	335	343	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-168	bHLH family protein