PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1036230.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 645aa MW: 71995.8 Da PI: 7.341 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.2 | 1.2e-12 | 353 | 399 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Pd.00g1036230.m01 353 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 399 799***********************66......*****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 645 aa Download sequence |
MGEKFWVNEE DRVMVESVLG TEACQFLTSL VSENVFTDLV RPPGKLGVQQ GLSQLVKGSN 60 WNYAIFWQVV GSKSGGSALI WGDGHCRDTK DGGVAGENSS LDGSFEGVQK KEEVKKWVLE 120 KLHACFGGLD EGYARRLDGV SDVEMFYLTS MYYAFQLDSH SGPGESYKSG KSIWVSDVGG 180 CLHHYQSRSY LARLAGFQTV VFVPMKSGVV ELGSVKANPE EQNLVNMVRN LFGESSSVQA 240 KAFPMIFGRE LSLGGPKSQS INIAFSPKIE EDSTFPPESF ELQSVGTSNG CQSEDSEVKL 300 FPQLNQMMVG GFSAPTIVSS SELPKDESSA QIDERKPRKR GRKPANGREE PLNHVEAERQ 360 RREKLNQRFY ALRAVVPNIS KMDKASLLGD AITYITDLQM KIRVMETENQ MGNNSQKQFP 420 VPEIDFQERH EDAVVRMNCP LDSHPVSEVI NTLREHKIVA QESNVSITDN DKVIHTFSIP 480 TEGGDAEQLK EKLSLQTSIE GGTKSLVNKL KVIRDYVSQW PILVRVLYRV LVDKFLAPFR 540 TISNVRCSDQ RSWKNDHGEE FLFVSSKSQR MRFCFRKTQL FSTLVVLLIL FSCLQLGEMR 600 HLKAEQWAKN HGLVLVSQYL ARGKAPPSGP NPCTHIPGRS SGICT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 335 | 343 | RKPRKRGRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16430.1 | 1e-168 | bHLH family protein |