PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1036040.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 684aa    MW: 76462.3 Da    PI: 6.5632
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1036040.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.40.000295135501355
                        HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                        R+ i +++ eLrel+P+ a      K s  + Le++++++  Lq
  Pd.00g1036040.m01 513 RQLIQDRIKELRELIPSgA------KCSIDSLLERTIKHMLFLQ 550
                        77899************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 684 aa     Download sequence    
MGTSDLHHVL RSLCFNTEWN YAIFWKLKYR ARMVLTWEDA YYDNCEQHDS SENRCFNKTL  60
DRLHDSHYSH DPLGLAVAKM SYHVYTLGEG IVGQVAVTRK HQWIFADNLF KNNCSPFQHC  120
DGWQSQFSAG IRTIVVVAVP HGVVQLGSLN KANKVANREE SPDIWSSVFP HIGKDSDSSY  180
VFPLPENCLK KAVELANKHG GLESSNLGCL ESAKLHQSKS SILNSEHSKL VGVELLDRTK  240
CKGESSGCKD TRMASMIYAN PLSHGSVQEN VNLCDSADLS ATFLNSAAHG RINVDRVDFY  300
QNEVLQVSEP SDVKFQKDLE NLDFQTESGH MDTSSTSMAF PAGCELHEAL GSAFLNKGNY  360
FDWEAEKNRD GIIIEMPERM KIGQLTSDSC QEHLLEAVVA NVCQSGNDVK SEKSFCKSMQ  420
SLLTTEKYPE PSSHTTHTID SENYSIDQPS LIAEDTQQCL SSSGVCGVIS PKWFSSPCPS  480
ACSEQLERSS GPSKNNKKRA RPGENSRPRP RDRQLIQDRI KELRELIPSG AKCSIDSLLE  540
RTIKHMLFLQ SITKHADKLN KCADAKLCHK EASMLGSSNY ERGSSWAVEV GGNLKVCSIM  600
VENLNKNGQM VVEMMCEECS HFLEIAEAIR SLGLTILKGV TEARSDKTWI CFVVEGQNNR  660
SIHRMDILWS LVQILQPKNS MQQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31280.11e-175bHLH family protein