PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1036040.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 684aa MW: 76462.3 Da PI: 6.5632 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.4 | 0.00029 | 513 | 550 | 13 | 55 |
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq Pd.00g1036040.m01 513 RQLIQDRIKELRELIPSgA------KCSIDSLLERTIKHMLFLQ 550 77899************77......7777779999999999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 684 aa Download sequence |
MGTSDLHHVL RSLCFNTEWN YAIFWKLKYR ARMVLTWEDA YYDNCEQHDS SENRCFNKTL 60 DRLHDSHYSH DPLGLAVAKM SYHVYTLGEG IVGQVAVTRK HQWIFADNLF KNNCSPFQHC 120 DGWQSQFSAG IRTIVVVAVP HGVVQLGSLN KANKVANREE SPDIWSSVFP HIGKDSDSSY 180 VFPLPENCLK KAVELANKHG GLESSNLGCL ESAKLHQSKS SILNSEHSKL VGVELLDRTK 240 CKGESSGCKD TRMASMIYAN PLSHGSVQEN VNLCDSADLS ATFLNSAAHG RINVDRVDFY 300 QNEVLQVSEP SDVKFQKDLE NLDFQTESGH MDTSSTSMAF PAGCELHEAL GSAFLNKGNY 360 FDWEAEKNRD GIIIEMPERM KIGQLTSDSC QEHLLEAVVA NVCQSGNDVK SEKSFCKSMQ 420 SLLTTEKYPE PSSHTTHTID SENYSIDQPS LIAEDTQQCL SSSGVCGVIS PKWFSSPCPS 480 ACSEQLERSS GPSKNNKKRA RPGENSRPRP RDRQLIQDRI KELRELIPSG AKCSIDSLLE 540 RTIKHMLFLQ SITKHADKLN KCADAKLCHK EASMLGSSNY ERGSSWAVEV GGNLKVCSIM 600 VENLNKNGQM VVEMMCEECS HFLEIAEAIR SLGLTILKGV TEARSDKTWI CFVVEGQNNR 660 SIHRMDILWS LVQILQPKNS MQQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31280.1 | 1e-175 | bHLH family protein |