PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1035960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 119aa MW: 13511.1 Da PI: 9.5581 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.6 | 3.7e-19 | 19 | 70 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +g+++AeIrd + + +r +lg+f ta+eAa+a+++a+ +++g+ Pd.00g1035960.m01 19 KYRGVRIRP-WGKFAAEIRDSTR---QgARLWLGTFNTAQEAARAYDRAAFSMRGP 70 8********.**********322...24*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence |
MEGGRSRGKA REEGQRDVKY RGVRIRPWGK FAAEIRDSTR QGARLWLGTF NTAQEAARAY 60 DRAAFSMRGP LAILNFPSEY VIREVEDGQM TPEAESSSII SPSCWRNDHK TEVYDGNIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23220.1 | 2e-24 | ERF family protein |